PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022619-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 817aa    MW: 90096.4 Da    PI: 7.1433
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022619-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.4e-05157178223
                    EETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                    kC +C++ F ++ n++rHir+H
  NNU_022619-RA 157 KCDKCSREFCSPINYRRHIRVH 178
                    7*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.432156178IPR007087Zinc finger, C2H2
SMARTSM003550.0098156178IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280158178IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 817 aa     Download sequence    Send to blast
MRPEQKVGKP EEGSDSLDSF IRQAIGREPF LSFPRAGDSP VQWIQLLHAL DQQGTAKLSK  60
GPKFNDNIEG KERHLGHCNG VSMYTSESNG VKESIHPIKS SGIAVKGTKS ASENMQTLKI  120
PEAVVAFAQA AAKANGEPEK YLPGWPLLSP SKVPMQKCDK CSREFCSPIN YRRHIRVHRR  180
SLNIDKDSPK NRDILGAFWD KLSLDESKEL VSFKNVTLEE VPGSSIIRAL TSFIWKPVFS  240
SLPQAYVKAG SALLDIIQAR PSKFPLSSQE LFSILDDASE NTFLCAGTAD SMQKFVFDGE  300
AGKIGLEMKN LVACTSFLVE QKLCKEYMCL YFIRFVGGVV TYHLSQVKAW IADKDAEALR  360
CQKLLVEEEE AAQKRQAEIL EKRRLKKLRQ KEQKSKEQTS VEKTDFKESS PETWEDLPSA  420
ETTSPVDVSD SHPCTSGEQL DPIQPSLEPN QLLDTDLEAD TGSHAGFSDP DVEMASGNTS  480
SANYQNVYHE VQQESSRRQM NAARRQLPKQ LKGTSNGFHS GQIPPMSKVG AAPKHGSYRD  540
QRATSTVNGH KVWTRKTKCE NEEECSNVKE QREFLNQSDQ NGSNELLIGS ISVTLGDCSG  600
GCQGNILAAS VDQCTSDYQP PRRNNTQEKP IKLDVCHSST SRSMVKLWRP VGRQEGSMAV  660
QNETREAEMD VNSGEGTDRI LSNESCLVQG NIDDNSSESR NGSSKLWEES TDARGLRLFS  720
SRAAAAFLAQ RWKEAIAADH VKLVLFPKTG PPGSPEILDD AEVATALPSD CCKVNNLGNA  780
GVGPLEVSPT GPNKAKFRGK PEKVIKLKYI PKQRNGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1380387EKRRLKKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241875.10.0PREDICTED: uncharacterized protein LOC104586368 isoform X1
TrEMBLE0CUZ70.0E0CUZ7_VITVI; Putative uncharacterized protein
STRINGVIT_16s0050g00700.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-106C2H2-like zinc finger protein